|
SNP
|
Gene
|
Chr
|
Location
|
Samples
|
Reads
|
REF/ALT + REF
|
FDR adj. p value
|
|---|
|
rs76148815
|
MTR
|
1
|
237,063,719
|
92
|
8029
|
0.07
|
5 × 10–217
|
|
rs7772210
|
MTCH1
|
6
|
36,936,771
|
58
|
8199
|
0.91
|
1 × 10–209
|
|
rs2260914
|
ZSCAN18
|
19
|
58,598,784
|
50
|
2967
|
0.07
|
2 × 10–199
|
|
rs1046138
|
PKP2
|
12
|
32,944,162
|
64
|
21,767
|
0.92
|
8 × 10–194
|
|
rs2075846
|
OXA1L
|
14
|
23,239,512
|
66
|
14,818
|
0.92
|
5 × 10–178
|
|
rs200574632
|
MUL1
|
1
|
20,826,784
|
64
|
3728
|
0.94
|
3 × 10–127
|
|
rs17850531
|
ECHDC3
|
10
|
11,805,339
|
56
|
2467
|
0.97
|
5 × 10–109
|
|
rs164577
|
SLC30A5
|
5
|
68,417,755
|
84
|
1374
|
0.03
|
8 × 10–107
|
|
rs312185
|
AP2S1
|
19
|
47,342,867
|
76
|
2040
|
0.96
|
2 × 10–114
|
|
rs2586306
|
ABR
|
17
|
909,451
|
76
|
2626
|
0.06
|
4 × 10–114
|
- The table shows the ten SNPs with the most significant ASE in the LV samples (n = 3774), the gene they are located within, the genomic location, number of heterozygous samples and reads overlapping the SNP available for ASE calling, the REF/ALT + REF ratio, and the FDR-adjusted p value for ASE
