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Table 7 SNPs with differential allele-specific expression in cardiac ischemia

From: Allele-specific expression in the human heart and its application to postoperative atrial fibrillation and myocardial ischemia

       Pre-bypass Post-bypass  
SNP Gene Chr Location Reads Samples REF/ALT + REF REF/ALT + REF FDR-adjusted p value
rs4871331 ZHX2 8 123,963,996 224 2 0.35 0.64 2 × 10–5
kgp9659493 CUL4A 13 113,918,770 1541 5 0.56 0.44 0.015
  1. The table shows the SNPs with differential ASE in the post-bypass sample compared with the baseline sample of the same individual, assessing the ASE response to cardiac ischemia. Shown is the gene each SNP is located within, the genomic location, number of reads overlapping the SNP, number of heterozygous individuals (each providing pre- and post-bypass sample), the REF/ALT + REF ratio, and the FDR-adjusted p value for differential ASE between the post-bypass compared to the pre-bypass