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Fig. 3 | Genome Medicine

Fig. 3

From: Weak sharing of genetic association signals in three lung cancer subtypes: evidence at the SNP, gene, regulation, and pathway levels

Fig. 3

Comparison of the SNPs located within the enhancer regions and their target genes. a Total number of enhancer target genes identified by FANTOM5. b UpSetR plot shows the overlap of FANTOM5 enhancer target genes by subtype. c Total number of enhancer target transcripts identified by IM-PET for two lung-related cell lines. d UpSetR plot shows the overlap of the lung cancer predicted enhancer target genes for IMR90 and NHLF identified by IM-PET. LUAD lung adenocarcinoma, LUSC lung squamous cell carcinoma, SCLC small cell lung cancer, SNP single-nucleotide polymorphism

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Genome Medicine

ISSN: 1756-994X

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