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Table 1 GWAS eQTL

From: Disease-specific regulation of gene expression in a comparative analysis of juvenile idiopathic arthritis and inflammatory bowel disease

Gene rsID IBD β IBD p val JIA β JIA p val IBD-GWAS ATH-GWAS Interact p
ARPC2 rs13429408 0.82 6.60E−05 0.18 0.22 CD, UC 0.01
CPTP rs11809901 − 1.08 9.80E−05 − 0.12 0.69 CD, UC 0.04
PAM rs2431321 1.04 3.80E−09 1.15 2.10E−23 RA 0.48
PAM rs32677 0.21 0.3 0.94 5.30E−15 RA 9.60E−05
C5 rs1468673 0.39 0.02 0.74 3.10E−07 RA 0.34
PRDX6 rs4279882 1.84 3.80E−05 0.36 0.05 RA 0.001
ADAM1A rs11066027 1.22 2.40E−05 0.61 5.30E−03 JIA, RA 0.09
RNASET2 rs385863 − 0.68 1.30E−04 − 1.05 1.40E−14 CD, UC RA 0.3
GSDMB rs11078926 − 0.51 5.90E−03 − 0.56 9.90E−07 CD, UC RA 0.87
SLC22A5 rs11739135 0.09 0.6 − 0.8 9.80E−10 CD, UC JIA 4.00E−05
SLC22A5 rs11950562 − 0.53 8.00E−04 − 0.86 6.10E−14 CD, UC JIA 0.07
ORMDL3 rs1565923 1.11 8.80E−07 0.47 6.20E−04 CD, UC RA 0.01
ICAM4 rs3093029 1.22 4.80E−04 1.3 2.90E−08 CD, UC JIA 0.69
RMI2 rs11644184 − 0.58 7.60E−04 − 0.7 3.00E−07 CD, UC JIA 0.54
PLTP rs7275164 − 0.56 2.10E−04 − 0.71 7.00E−07 CD, UC RA 0.58
CD226 rs12969613 0.63 2.20E−07 0.18 0.15 CD, UC RA 0.11
NOD2 rs1981760 1.28 2.70E−08 1.05 2.30E−16 CD 0.23
GBAP1 rs914615 0.6 3.20E−04 0.8 7.80E−10 CD 0.62
GBAP1 rs3814319 0.16 0.33 0.7 1.20E−06 CD 0.05
KSR1 rs2945378 − 0.48 6.20E−03 − 0.6 4.40E−07 CD 0.52
SULT1A1 rs7191548 − 0.49 6.50E−03 − 0.61 5.30E−07 CD, UC 0.93
PNKD rs13430006 0.34 0.14 0.57 6.80E−07 CD, UC 0.41
NLRP2 rs12975582 0.56 0.01 0.8 1.20E−06 CD, UC 0.43
SLC11A1 rs78846874 − 0.35 0.36 − 0.83 3.90E−06 CD, UC 0.22
LGALS9 rs1984547 − 0.88 2.40E−05 − 0.55 4.10E−05 CD, UC 0.16