Table 1 Summary of sample size and provenance
Biological source | No. of samples with SNV and CNV data | No. of samples with driver alterations in whole exome | No. of samples with driver alterations in IMPACT410 | |
|---|---|---|---|---|
TCGA [10] | Patients | 4058 | 3935 | 3850 |
MSK-IMPACT [12] | Patients | 10,945 | – | 9869 |
Novartis PDXs [17] | PDXs | 375 | 375 | 375 |
OncoTrack [19] | Patients | 117 | 109 | 109 |
PDXs | 59 | 59 | 59 | |
Organoids | 46 | 46 | 46 | |
GDSC Cell Lines [18] | Cell lines | 908 | 904 | 904 |
TOTAL | – | 16,508 | 5428 | 15,212 |