Fig. 2
From: Relating the gut metagenome and metatranscriptome to immunotherapy responses in melanoma patients
Genera and species related to progression-free survival. a, b For genera or species selected > 125 times in 500 × 10-fold cross-validated elastic-net penalized Cox regression and with FDR-adjusted q < 0.20 in either the 16S or shotgun data, we show number of times selected and the hazard ratio. Note: not all genera and species were detected in both the 16S and shotgun data. c, d Scatterplots of 16S vs. shotgun relative abundance of genera and species, for genera and species selected in the regression and detected in both the 16S and shotgun data. Spearman’s rho and p value are displayed on the plots