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Fig. 4 | Genome Medicine

Fig. 4

From: The murine Microenvironment Cell Population counter method to estimate abundance of tissue-infiltrating immune and stromal cell populations in murine samples using gene expression

Fig. 4

Comparison of the performance of mMCP-counter with other published methods. The three methods have been applied to 50 simulated RNA mixture sets, each comprising 50 randomized mixtures, generated from the Haemopedia (a) and ImmGen ULI datasets (b). This graph shows the Pearson correlation between the mixture compositions and the scores returned by the methods for each population on all mixture sets. Full lines indicate correlation equal to 0 and 1. Dashed lines indicate correlations equal to 0.7 and 0.5. An asterisk indicates that for memory B cells, there were only 2 datasets where ImmuCC returned non-all-zero scores and where its performance could therefore be assessed

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Genome Medicine

ISSN: 1756-994X

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