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Fig. 2 | Genome Medicine

Fig. 2

From: Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Fig. 2

SARS-CoV-2 landscape of conserved regional sequences. A total of 1977 conserved 25-mers (“anchor 25-mers”) were identified from the 3968 SARS-CoV-2 genome sequences included in the k-mer analysis. a Distribution of anchor 25-mers across the (i) SARS-CoV-2 genome. Individual anchor 25-mers are shown as (ii) black lines with their overall density. Conserved regions consist of either discrete or overlapping anchor 25-mers and vary in total length (black rug plot). The density of conservation refers to the total number of base pairs comprising anchor 25-mers within each consecutive 100-bp window across the genome (red kernel density plot). b The total number of conserved base pairs within each given region of the genome varies across ORFs and genes

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Genome Medicine

ISSN: 1756-994X

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