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Table 3 Viral mutation fingerprint comparisons

From: Profiling SARS-CoV-2 mutation fingerprints that range from the viral pangenome to individual infection quasispecies

Patient Private mutation1 Reported mutations2 Strict matching # genomes3 Relaxed matching # genomes4 Ratio relaxed criteria
P125   3037C>T, 23403A>G 17,851 43,943 5.806345E−01
P126 8084C>T 27641C>T 0 0 0.000000E+00
P128   3037C>T 66 61,952 8.185938E−01
P132 16876A>G 27970C>T 0 0 0.000000E+00
P133   3037C>T, 8389C>T, 23403A> 37 115 1.519536E−03
P137   27131C>T 1 15 1.982003E−04
P138   27925C>T 0 22 2.906938E−04
P139   27670G>T 1 34 4.492541E−04
P140   3037C>T 66 61,952 8.185938E−01
P142   16375C>T 0 16 2.114137E−04
P144   26625C>T, 27874C>T 0 0 0.000000E+00
P145 2721C>T 8092C>T, 17747C>T, 17858A>
18060C>T, 28144T>C
0 0 0.000000E+00
P146   26951G>T, 27874C>T 3 0 0.000000E+00
P151   21646C>T 0 257 3.395833E−03
P152   3037C>T, 22289G>T, 23403A> 4 9 1.189202E−04
P162   7482C>T 0 10 1.321336E−04
  1. 1Private mutations refer to those with a frequency less than 0.001%
  2. 2Mutation in bold are non-synonymous
  3. 3Strictly refers to other samples with the exact same number of mutations
  4. 4Relaxed refers to samples that are inclusive for these mutations but may have others