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Table 2 Average GC-content and coverage breadth of sequenced samples

From: Single-cell sequencing of the small and AT-skewed genome of malaria parasites

Reads Sample name (#) Average of mean coverage (X) Average GC content Average coverage breadth
Whole genome Genic regions Intergenic regions
All mappable reads EOM (13) 37.54 21.4% 57.9% 78.0% 27.8%
LOM (10) 43.10 22.4% 57.3% 79.0% 25.0%
COM (2) 9.54 20.7% 48.0% 67.7% 18.5%
ENM (1) 1.47 25.0% 23.0% 34.4% 6.1%
LNM (1) 20.43 24.3% 47.4% 67.9% 16.9%
Dd2_bulk (1) 75.83 18.9% 96.1% 97.0% 94.9%
Clinical_bulk (1) 0.03 19.7% 0.3% 0.3% 0.2%
Down-sampled* EOM (13) 1.66 21.4% 30.9% 47.2% 6.7%
LOM (10) 1.69 22.4% 32.1% 49.8% 5.8%
COM (2) 1.66 20.8% 31.1% 47.0% 7.5%
ENM (1) 1.33 25.2% 21.7% 32.9% 5.0%
LNM (1) 1.62 24.3% 26.2% 40.3% 5.1%
Dd2_bulk (1) 1.85 18.8% 76.8% 80.6% 71.2%
  1. *Down-sampling is to 300,000 mappable reads based on the sample with the lowest number of mappable reads (ENM)