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Table 1 A summary of GWAS data in iCPAGdb

From: An atlas connecting shared genetic architecture of human diseases and molecular phenotypes provides insight into COVID-19 susceptibility

 

Type

Traits/diseases #

SNPs (p < 5e−8)

Trait-SNP associations #

Website

NHGRI catalog

Clinical GWAS

3793

63,933

85,639

https://www.ebi.ac.uk/gwas/

H2P2

Molecular/ cellular GWAS

79 (44 flow cytometric phenotypes + 35 cytokines)

17

3489 (p < 1e−5)

http://h2p2.oit.duke.edu

Blood metabolites

Molecular GWAS

491 blood (453 metabolites + 38 xenobiotics)

1441

2024

http://metabolomics.helmholtz-muenchen.de/gwas/

Urine metabolites

Molecular GWAS

55 urine

149

171

http://metabolomics.helmholtz-muenchen.de/gwas/

Sum

 

4418

65,540

91,323

 
  1. GWAS summary statistics were clumped to include only a lead SNP for each trait locus