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Fig. 2 | Genome Medicine

Fig. 2

From: Genome-scale CRISPR screens identify host factors that promote human coronavirus infection

Fig. 2

Identification of host factors that promote HCoV infection of Vero E6 cells. Vero E6 cells transduced with a C. sabaeus-specific sgRNA library were infected with SARS-CoV-2 or OC43 at MOI 0.01, resistant cells reinfected at MOI 0.01, and sgRNAs in resistant clones sequenced. MAGeCK analysis of multiple replicates compared to uninfected control library replicates yielded log2fold changes (log2FC) that were plotted on the x-axis. Negative log10-transformed false discovery rates (FDR) were plotted on the y-axis. Data are presented for SARS-CoV-2 (A) and OC43 (B) Vero E6 infections. The heat maps display the log2FC for the 20 top-scoring genes comparing results for SARS-CoV-2 and OC43 infections. Genes targeted by significantly enriched sgRNAs (FDR < 0.25) were segregated into functional categories using PANTHER for SARS-CoV-2 (C) and OC43 (D) infections

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