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Table 2 Characteristics of the recruited index cases

From: The clinical utility and costs of whole-genome sequencing to detect cancer susceptibility variants—a multi-site prospective cohort study

Demographic

Index cases

Number

Percentage

Sex

 Female

141

72.3

 Male

54

27.7

Age at first diagnosis

 18 and under

16

8.2

 19–49

125

64.1

 50 and over

54

27.7

Prior genetic testing

 Uninformative resulta

140

71.8

 None

55

28.2

Recruitment site

 QLD

46

23.6

 VIC

58

29.7

 TAS

14

7.2

 SA

21

10.8

 NSW

29

14.9

 WA

27

13.8

Study referral

 Meets direct eligibility requirements

157

80.5

 Eligible via independent panel assessment

38

19.5

Virtual panel used

 Panel A (107 genes)

24

12.3

 Panel B (101 genes)

171

87.7

Broad tumour-associated phenotypeb

 Gynaecological and breast

  Breast

43

22.1

  Endometrial

12

6.2

  Ovarian

9

4.6

  Cervical

4

2.1

  Other gynaecological

2

1.0

 Urogenital

  Renal cell carcinoma

35

17.9

  Prostate

6

3.1

  Urothelial carcinoma

3

1.5

  Other urogenital

13

6.7

 Neuroendocrine

  Thyroid

29

14.9

  Non-thyroid

26

13.3

 Polyposis

  Adenomas or adenomatous polyposis

28

14.4

  Serrated polyps

6

3.1

  Hyperplastic polyps

6

3.1

  Hamartomatous or Juvenile polyps

1

0.5

  Other polyps

6

3.1

 Gastrointestinal

  Colorectal

28

14.4

  Upper gastrointestinal

11

5.6

 Skin cancer

  Melanoma

21

10.8

  Non-melanoma

14

7.2

 Sarcoma

  Soft tissue

10

5.1

  Bone

4

2.1

  Other sarcoma

3

1.5

 Respiratory

12

6.2

 Head and neck

8

4.1

 Brain

8

4.1

 Lymphoma

8

4.1

 Non-endocrine pancreatic

7

3.6

 Unknown primary

3

1.5

 Non-brain neurological

1

0.5

 Other

43

22.1

  1. aInclusive of immunohistochemistry (IHC) analysis of somatic tissue and other somatic tissue testing in addition to germline genetic testing
  2. bPercentage may not add to 100% as index cases may have been diagnosed with more than one tumour-associated phenotype