Table 1 ONT long-read sequencing statistics
Tumor tissues (n = 78) | Normal tissues (n = 10) | Overall (n = 88) | |
|---|---|---|---|
All reads | |||
Average read number (million) | 8.17 | 6.04 | 7.92 |
Average length (kb) | 9.85 | 1.13 | 1.02 |
Median length (kb) | 0.81 | 0.93 | 0.82 |
N50 read length (kb) | 1.09 | 1.33 | 1.11 |
Maximum read length (kb) | 1.89 | 7.69 | 2.55 |
Average read quality | 10.74 | 12.84 | 10.98 |
Aligned reads | |||
Average read number (million) | 7.84 | 5.88 | 7.62 |
Average length (kb) | 0.92 | 1.11 | 0.94 |
Median length (kb) | 0.75 | 0.92 | 0.77 |
N50 read length (kb) | 1.05 | 1.31 | 1.08 |
Maximum read length (kb) | 18.46 | 76.90 | 25.10 |
Average read quality | 10.81 | 12.84 | 11.04 |
Average percent identity (%) | 89.96 | 92.82 | 90.29 |
Median percent identity (%) | 90.68 | 94.03 | 91.06 |