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Fig. 2 | Genome Medicine

Fig. 2

From: Bacterial genome-wide association study substantiates papGII of Escherichia coli as a major risk factor for urosepsis

Fig. 2

Genomic characterisation of the E. coli strains collected for this study (one strain per clinical case, n = 825). a Core genome phylogeny, phylogroup assignment, sequence type (ST) (eight most frequent ST are coloured, rare STs in grey), papG variant, occurrence of the iuc operon, and phenotypic ceftriaxone resistance. b Frequency distribution of the E. coli phylogroups and their respective capsule types. c Number of virulence factors detected per E. coli phylogroup. d Number of genes associated with antimicrobial resistance per E. coli phylogroup

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Genome Medicine

ISSN: 1756-994X

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