Fig. 4

A, B UMAP representation of dimensionally reduced data from T0 and 24 h ctrl TSCs following batch-corrected graph-based clustering of all datasets colored by A experimental condition and B cell type. C Quantile-quantile plot comparing the proportion distributions of respective cell lineages across all T0 and ctrl TSCs. D Scatter plot indicating average log expression of marker genes for T0 cell lineages in T0 and ctrl TSC in respective cell lineage, annotated with the number of marker genes examined. Pearson’s co-efficient was calculated using non-log transformed values